INCF

SciCommons is an open source platform for researchers to interact, review, and discuss scientific papers. My project focuses on making the platform a...

This project studies the development of a tiny worm called Caenorhabditis elegans, focusing on how its cells divide, grow, and interact during its...

The EBRAINS Software Distribution is a monolithic Spack environment that takes over 48 hours to build, making rapid deployment and testing difficult....

This project aims to further develop an open-source intracranial EEG (iEEG) analysis platform by integrating clinically relevant seizure detection...

Problem: Currently, resonance frequency-based HRV training is backed by robust scientific evidence, but it remains inaccessible to the masses due to...

The Virtual Brain (TVB) provides an open-source simulation framework for whole-brain network modeling. Unlike the traditional approach of using...

This project builds an automated benchmarking ecosystem for goal-directed vision. It implements a high-priority leaderboard featuring automatic...

This project will have the aim to derive the empirical HRF for each brain region and each subject from BOLD recordings, and then to use this HRF in a...

The project aims to improve longitudinal normative modelling in PCNtoolkit by validating, debugging, and extending velocity-based models to support...

This project proposes a modular, real-time gesture-to-sound mapping framework for the GestureCap system. It will enable users to translate hand...

This project develops an expressive gesture-to-sound mapping layer for GestureCap, enabling low-latency gesture data to control playable instruments...

The Medical Informatics Platform (MIP) currently lacks standardized automated governance for its federated infrastructure, leading to deployment...

This project will improve AnalySim’s core reliability by addressing fragile user workflows, improving query and search behavior, and making the...

This project aims to improve the reliability and maintainability of the LORIS electrophysiology browser through scoped enhancements to browser...

MRI quality control (QC) is an essential but highly manual and repetitive process in neuroimaging research. Currently, reviewers must navigate...

This project accelerates the convolution core of the Active Segmentation Plugin (ASP) in ImageJ by offloading its most compute-intensive pixel...

The project develops an improved Python-based CLI for the CBRAIN distributed computing platform, aiming on usability and modular design. It replaces...

Implement an ast based behavioral filter enabling queries like `(treadmill>0 and eye is not nan) & screen == video`, and expand dataset support with...

HarmonyHub is an open-source platform designed to improve music education through interactive and technology-driven learning experiences. While the...

The application of Network Control Theory to medical neuroimaging consistently faces the approximation crisis. Current tools rely on infinite-horizon...

This project focuses on improving the computational efficiency and biological realism of synaptic modeling in HNN-Core by refactoring how synapses...

Problem: Brian2CUDA offers significant GPU acceleration for neural simulations, but its current "beta" state contains friction points that hinder...

This project enhances NiMARE’s performance and developer accessibility through a dual-phase optimization strategy. The first phase modernizes the...

GeNN is a C++ library that generates code for efficiently simulating Spiking Neural Networks (SNNs) using GPUs. In order to compile this generated...

Traditionally, brain activity has been analyzed independently from peripheral physiological measurements like the electrocardiogram (ECG), but our...

This project will involve refactoring the Human Neocortical Neurosolver (HNN-core) codebase to enable flexible development of neural circuits with...

Last year, work on GestureCap focused on developing an Arduino-based latency measurement system and optimizing the pipeline for low-latency...

This project will convert Macaque auditory thalamocortical circuits model based on NetPyNE implementation into NeuroML standard formats and testing...

GeNN is a C++ library used for simulating Spiking Neural Networks through GPU-based code generation (CUDA/HIP). Currently, its accessibility is...

The nematode Caenorhabditis elegans serves as a pivotal model organism in developmental biology due to its well-defined cell lineage, compact genome,...

HarmonyHub is an open-source, modular web application designed to revolutionize music education by integrating modern technologies and pedagogical...

This proposal outlines a novel computational framework for modeling neural developmental programs using Growing Hypergraph Neural Networks (Growing...

This project develops an open portal for goal-directed vision research, integrating eye-tracking datasets and machine learning models with tools for...

​The Human Neocortical Neurosolver (HNN) is an open-source neural modeling tool designed to help researchers and clinicians interpret human brain...

The project will develop a Python-based CLI for CBRAIN using its Python API Client Swagger API, allowing advanced users to manage research data and...

The project will develop the first version of an app that uses Bluetooth to connect with heart-rate and respiration sensors, calculate metrics of...

SciCommons is an open-source platform aimed at improving the scientific peer review process through better user experience and web application...

This project aims to replace Simulation-Based Inference (SBI) methods with Markov Chain Monte Carlo (MCMC) techniques for inference problems...

This project aims to replace Brian’s current just-in-time (JIT) compilation system, which relies on Cython. While functional, Cython introduces slow...

This project focuses on enhancing the overall workflow by improving the detection and configuration of the Emscripten toolchain. It aims to optimize...

While music educators strive to provide personalized learning paths, existing educational tools often lack the flexibility to adapt to diverse...

This project aims to build an automated workflow to register BIDS-compliant neuroimaging datasets from external repositories (e.g. Public nEUro) into...

The Active Segmentation Platform for ImageJ (ASP/IJ) aims to provide a general-purpose workbench that allows biologists and other domain experts to...

This project builds an AI-powered agent for KnowledgeSpace using Retrieval-Augmented Generation (RAG) to deliver precise, context-aware, and...

LORIS is a comprehensive data management platform that supports diverse datasets in neuroscience research, including imaging, behavioural, clinical,...

NiiVue is a versatile tool for visualizing and handling neuroimaging data, but insufficient documentation creates friction in using it in deploying...

Project Deliverables • Admin Section : Implement an admin dashboard to manage users, projects, and datasets. Add moderation tools for handling...

SustainHub is an AI-driven simulation platform designed to study and enhance the sustainability of open-source communities. It models contributors,...