OpenMS Inc
Advancing Algorithms & AI for Biomedical Insights
- 5
- Projects
- 2
- Years accepted
- 3
- In 2026
Projects by year
52026
3 acceptedShow
imzML Parser in OpenMS
Accepted project · by Aditya Sarna
Mass spectrometry imaging (MSI) is a powerful analytical technique that enables spatial mapping of molecules within biological tissues. The imzML...
Optimizing Casanovo for Real Time De Novo Peptide Sequencing
Accepted project · by Gaurav SRC
Casanovo is a transformer-based de novo peptide sequencer that is too slow for real-time instrument use. I will profile the new non-autoregressive...
Unify Development Dependencies using Vcpkg
Accepted project · by NPC
Like many large scale software projects, OpenMS has numerous development dependencies. Unfortunately, there is no straightforward way to quickly and...
2025
2 acceptedShow
Accelerated Read/Write and Robust OpenMS Workflows (ARROW)
Accepted project · by Avni Badiwale
This is a biparted project in which we first focus on integrating Apache Arrow into OpenMS’s build system and dependency management framework, as...
Optimizing Casanovo for Fast and Accurate De Novo Peptide Sequencing
Accepted project · by lingwen xu
I'm tackling Casanovo's slow beam search decoding, which stalls big proteomics datasets. By reducing GPU-CPU transfers and removing redundant steps,...
